150 lines
4.5 KiB
Python
150 lines
4.5 KiB
Python
from collections import OrderedDict
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import torch
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import numpy as np
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from matplotlib import pyplot as plt
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from scipy.signal import butter, filtfilt
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import pywt
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from models.lstm import LSTMModel
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class BPModel:
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def __init__(self, model_path, fps=30):
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self.fps = fps
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self.model = LSTMModel()
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self.load_model(model_path)
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self.device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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self.model = self.model.to(self.device)
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self.model.eval()
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self.warmup()
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def predict(self, frames):
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yg, g, t = self.process_frame_sequence(frames, self.fps)
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yg = yg.reshape(1, -1, 1)
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inputs = torch.tensor(yg.copy(), dtype=torch.float32)
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inputs = inputs.to(self.device)
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with torch.no_grad():
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sbp_outputs, dbp_outputs = self.model(inputs)
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sbp_outputs = sbp_outputs.cpu().detach().numpy().item()
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dbp_outputs = dbp_outputs.cpu().detach().numpy().item()
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return sbp_outputs, dbp_outputs
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def load_model(self, model_path):
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model_state_dict = torch.load(model_path)
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#判断model_state_dict的类型是否是OrderedDict
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if not isinstance(model_state_dict, OrderedDict):
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# model_state_dict=model_state_dict.state_dict()
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#若不是OrderedDict类型，则为LSMTModel类型，直接加载
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self.model = model_state_dict
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return
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#判断是否是多GPU训练的模型
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if 'module' in model_state_dict.keys():
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self.model.load_state_dict(model_state_dict['module'])
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else:
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#遍历模型参数，判断参数前是否有module.
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new_state_dict = {}
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for k, v in model_state_dict.items():
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if 'module.' in k:
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name = k[7:]
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else:
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name = k
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new_state_dict[name] = v
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self.model.load_state_dict(new_state_dict)
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# 模型预热
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def warmup(self):
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inputs = torch.randn(10, 250, 1)
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inputs = inputs.to(self.device)
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with torch.no_grad():
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self.model(inputs)
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def wavelet_detrend(self, signal, wavelet='sym6', level=6):
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"""
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小波分解和基线漂移去除
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参数:
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signal (numpy.ndarray): 输入信号
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wavelet (str): 小波基函数名称,默认为'sym6'
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level (int): 小波分解层数,默认为6
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返回:
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detrended_signal (numpy.ndarray): 去除基线漂移后的信号
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"""
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# 执行小波分解
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coeffs = pywt.wavedec(signal, wavelet, level=level)
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# 获取第六层近似分量(基线漂移)
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cA6 = coeffs[0]
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# 重构信号,去除基线漂移
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coeffs[0] = np.zeros_like(cA6) # 将基线漂移分量置为零
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detrended_signal = pywt.waverec(coeffs, wavelet)
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return detrended_signal
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def butter_bandpass(self, lowcut, highcut, fs, order=5):
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nyq = 0.5 * fs
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low = lowcut / nyq
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high = highcut / nyq
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b, a = butter(order, [low, high], btype='band')
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return b, a
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def butter_bandpass_filter(self, data, lowcut, highcut, fs, order=5):
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b, a = self.butter_bandpass(lowcut, highcut, fs, order=order)
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y = filtfilt(b, a, data)
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return y
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def process_frame_sequence(self, frames, fps):
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"""
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处理帧序列
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参数:
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frames (list): 包含所有帧的列表,每一帧为numpy.ndarray
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返回:
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t (list): 时间序列(秒),从0开始
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yg (numpy.ndarray): 处理后的绿色通道数据
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green (numpy.ndarray): 原始绿色通道数据
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"""
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all_frames = frames
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green = []
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for frame in all_frames:
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r, g, b = (frame.mean(axis=0)).mean(axis=0)
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green.append(g)
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t = [i / fps for i in range(len(all_frames))]
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g_detrended = self.wavelet_detrend(green)
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lowcut = 0.6
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highcut = 8
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datag = g_detrended
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yg = self.butter_bandpass_filter(datag, lowcut, highcut, fps, order=4)
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# self.plot(green, t, 'Original Green Channel',color='green')
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# self.plot(g_detrended, t, 'Detrended Green Channel', color='red')
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# self.plot(yg, t, 'Filtered Green Channel',color='blue')
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return yg, green, t
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def plot(self, yg, t,title,color='green',figsize=(30, 10)):
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plt.figure(figsize=figsize)
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plt.plot(t, yg, label=title, color=color)
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plt.xlabel('Time (s)')
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plt.ylabel('Amplitude')
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plt.legend()
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plt.show()
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